-
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freebayes
... the same population
(e.g. many human individuals) simultaneously. The algorithm exploits a neutral
model of allele diffusion to impute most ... suitable
for use in population calling, and they must be modified.
Users may add RG tags to BAM files which were ...
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CuEfflux
... to the
workspace and the vector `params` will have been modified accordingly.
**rxnDef**: specifies all reactions used by all models. ... parameters `c(list(nu=nu, a=a), params)`. The
simulation algorithm is set to `daspk` which is best suited for stiff ...
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AHRD
... a batch system like LSF this line has to be modified to something like @bsub -q normal 'java -Xmx2048m - ... 5
token_score_database_score_weight: 0.3
token_score_overlap_score_weight: 0.2
Since the algorithm is based on protein sequences and the BLASTX ...
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encore
... )
-s [ --snprank ] Perform SNPrank analysis *mode*
--gamma arg (=0.85) SNPrank algorithm damping factor
-g [ --gain ] Calculate GAIN *mode*
-r [ --regain ] Calculate regression ...
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AHRD
... a batch system like LSF this line has to be modified to something like @bsub -q normal 'java -Xmx2048m - ... 5
token_score_database_score_weight: 0.3
token_score_overlap_score_weight: 0.2
Since the algorithm is based on protein sequences and the BLASTX ...
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ga_k-means_clustering
... the NP hard clustering problem in n^2 time
GA: Genetic Algorithms
This solution uses a simple GA with adjustable ... :
This solution uses a slightly modified version of the standard k-means clustering algorithm to adjust randomly initialized
centers by ...
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hybrid-pm
... properties and cost.
Optimization algorithm tries to minimize the overall cost.
The FEA model can be modified to optimize other ... - Vector fields
* R: for data process
* Rgenoud: R package for genetic optimization
This is not a full project, but a test ...
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ahni
...
# AHNI - Another HyperNEAT Implementation
AHNI implements the HyperNEAT neuroevolution algorithm, see http://eplex.cs.ucf.edu/hyperNEATpage/HyperNEAT. ... .
## Notes
AHNI was built on top of a modified version of ANJI (Another NEAT Java Implementation) by ...
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squeezegn
... input file size.
# Principle of Operation #
The squeezegene compression algorithm performs compression by first building a dictionary of ... the terms of this License.
c) If the modified program normally reads commands interactively
when run, you ...
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node-evolve
... easy to generate genetically-modified C code, and binary programs (and also OpenCL kernels, for genetic GPGPU programming). ... 0,0,0]
# define a block of evolvable code, algorithm, neural network..
func = evolve.mutable ->
# the evolved code ...
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